Score |
Strand | Gene name |
Blattner ID |
Description |
EcoCyc link |
SwissProt comment |
| 3.087876 | - | slyA | b1642 | transcriptional regulator for cryptic hemolysin |
EG13408 |
FUNCTION: TRANSCRIPTIONAL ACTIVATOR THAT ACTIVATES A CRYPTIC
HEMOLYSIN.
SIMILARITY: BELONGS TO THE MARR FAMILY OF TRANSCRIPTIONAL
REGULATORS.
|
| 2.462618 | - | rplU | b3186 | 50S ribosomal subunit protein L21 |
EG50001 |
FUNCTION: THIS PROTEIN BINDS TO 23S RIBOSOMAL RNA IN THE PRESENCE
OF PROTEIN L20.
MASS SPECTROMETRY: MW=11562.7; METHOD=MALDI.
SIMILARITY: BELONGS TO THE L21P FAMILY OF RIBOSOMAL PROTEINS.
|
 | | rpmA | b3185 | 50S ribosomal subunit protein L27 |
EG50002 |
MASS SPECTROMETRY: MW=8993.5; METHOD=MALDI.
SIMILARITY: BELONGS TO THE L27P FAMILY OF RIBOSOMAL PROTEINS.
|
| | yhbE | b3184 | orf, hypothetical protein |
EG11499 |
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN (PROBABLE).
SIMILARITY: BELONGS TO THE EAMA TRANSPORTER FAMILY. STRONG, TO
H.INFLUENZAE HI0878.
|
| | yhbZ | b3183 | putative GTP-binding factor |
EG12795 |
SIMILARITY: BELONGS TO THE GTP1 / OBG FAMILY. STRONG, TO
H.INFLUENZAE HI0877.
|
| 1.909935 | + | ycbG | b0956 | putative dehydrogenase |
EG12855 |
SIMILARITY: STRONG, TO H.INFLUENZAE HI1323.
|
| 1.853154 | + | b1587 | b1587 | putative oxidoreductase, major subunit |
EG13843 |
FUNCTION: TERMINAL REDUCTASE DURING ANAEROBIC GROWTH ON
VARIOUS SULFOXIDE AND N-OXIDE COMPOUNDS (BY SIMILARITY).
COFACTOR: MOLYBDENUM (MOLYBDOPTERIN); MAY BIND A 4FE-4S CLUSTER
(BY SIMILARITY).
SUBCELLULAR LOCATION: CYTOPLASMIC FACE OF THE MEMBRANE (BY
SIMILARITY).
SIMILARITY: BELONGS TO THE PROKARYOTIC MOLYBDOPTERIN-CONTAINING
OXIDOREDUCTASE FAMILY.
|
| | b1588 | b1588 | putative oxidoreductase, major subunit |
EG13844 |
FUNCTION: TERMINAL REDUCTASE DURING ANAEROBIC GROWTH ON
VARIOUS SULFOXIDE AND N-OXIDE COMPOUNDS (BY SIMILARITY).
COFACTOR: MOLYBDENUM (MOLYBDOPTERIN); MAY BIND A 4FE-4S CLUSTER
(BY SIMILARITY).
SUBCELLULAR LOCATION: CYTOPLASMIC FACE OF THE MEMBRANE (BY
SIMILARITY).
SIMILARITY: BELONGS TO THE PROKARYOTIC MOLYBDOPTERIN-CONTAINING
OXIDOREDUCTASE FAMILY.
|
| | b1589 | b1589 | putative oxidoreductase, Fe-S subunit |
|
|
| | b1590 | b1590 | putative DMSO reductase anchor subunit |
|
|
| | b1591 | b1591 | putative oxidoreductase component |
EG13847 |
SIMILARITY: TO H.INFLUENZAE HI1044.
SIMILARITY: BELONGS TO THE YCDY/YNFI FAMILY.
|
| | b1592 | b1592 | putative chloride channel |
|
|
| 1.618140 | - | phoE | b0241 | outer membrane pore protein E (E,Ic,NmpAB) |
EG10729 |
FUNCTION: THIS IS ONE OF THE PROTEINS INDUCED WHEN E.COLI CELLS
ARE GROWN UNDER PHOSPHATE LIMITATION. ITS PROTEIN PORE IS
PARTICULARLY EFFICIENT IN THE UPTAKE OF INORGANIC PHOSPHATE,
PHOSPHORYLATED COMPOUNDS, AND SOME OTHER NEGATIVELY CHARGED
SOLUTES.
SUBUNIT: HOMOTRIMER.
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. OUTER MEMBRANE.
SIMILARITY: BELONGS TO THE OMPC/PHOE FAMILY OF PORINS.
|
| 1.348173 | + | b1604 | b1604 | orf, hypothetical protein |
EG13929 |
SIMILARITY: IN THE N-TERMINAL, TO E.COLI YJFY.
|
| 1.343379 | + | yhcA | b3215 | putative chaperone |
EG11515 |
SUBCELLULAR LOCATION: PERIPLASMIC (BY SIMILARITY).
SIMILARITY: BELONGS TO THE PERIPLASMIC PILUS CHAPERONE FAMILY.
SIMILARITY: CONTAINS 1 IMMUNOGLOBULIN-LIKE DOMAIN.
|
| | yhcD | b3216 | putative outer membrane protein |
EG12810 |
FUNCTION: INVOLVED IN THE EXPORT AND ASSEMBLY OF A FIMBRIAL
SUBUNIT ACROSS THE OUTER MEMBRANE (BY SIMILARITY).
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. OUTER MEMBRANE
(BY SIMILARITY).
SIMILARITY: BELONGS TO THE FIMBRIAL EXPORT USHER FAMILY.
|
| | yhcE | b3217 | orf, hypothetical protein |
|
|
| 1.304879 | + | b1445 | b1445 | orf, hypothetical protein |
EG13767 |
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN (POTENTIAL).
SIMILARITY: STRONG, TO E.COLI YJDO.
|
| | b1446 | b1446 | orf, hypothetical protein |
EG13768 |
|
| 1.245224 | + | umuD | b1183 | SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC |
EG11057 |
FUNCTION: INVOLVED IN UV PROTECTION AND MUTATION. ESSENTIAL FOR
INDUCED (OR SOS) MUTAGENESIS. MAY MODIFY THE DNA REPLICATION
MACHINERY TO ALLOW BYPASS SYNTHESIS ACROSS A DAMAGED TEMPLATE.
SIMILARITY: BELONGS TO PEPTIDASE FAMILY S24; ALSO KNOWN AS THE
UMUD/LEXA FAMILY.
|
| | umuC | b1184 | SOS mutagenesis and repair |
EG11056 |
FUNCTION: INVOLVED IN UV PROTECTION AND MUTATION. ESSENTIAL FOR
INDUCED (OR SOS) MUTAGENESIS. MAY MODIFY THE DNA REPLICATION
MACHINERY TO ALLOW BYPASS SYNTHESIS ACROSS A DAMAGED TEMPLATE.
SIMILARITY: BELONGS TO THE IMPB/MUCB/SAMB FAMILY.
|
| 1.241142 | + | ygiL | b3043 | putative fimbrial-like protein |
EG12363 |
SIMILARITY: BELONGS TO THE FIMA/PAPA FAMILY OF FIMBRIA PROTEINS.
|
| 1.191998 | - | hlyE | b1182 | hemolysin E |
EG13243 |
FUNCTION: HEMOLYTIC ON SHEEP BLOOD AGAR. FORMS PORE.
SUBCELLULAR LOCATION: SECRETED (POTENTIAL).
DOMAIN: THE TRANSMEMBRANE DOMAIN IS BELIEVED TO BE INVOLVED IN
PORE FORMATION BY THE CYTOTOXIN.
|
| 1.158339 | + | yeaI | b1785 | orf, hypothetical protein |
EG13495 |
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN (POTENTIAL).
SIMILARITY: BELONGS TO THE YAIC / YFIN (E.COLI), YHCK (B.SUBTILIS)
FAMILY.
|
| | yeaJ | b1786 | orf, hypothetical protein |
EG13496 |
SIMILARITY: BELONGS TO THE YEGE/YHDA/YHJK/YJCC FAMILY.
|
| | yeaK | b1787 | orf, hypothetical protein |
EG13497 |
|
| 1.112146 | + | ansA | b1767 | cytoplasmic L-asparaginase I |
EG10045 |
CATALYTIC ACTIVITY: L-ASPARAGINE + H(2)O = L-ASPARTATE + NH(3).
SUBUNIT: HOMOTETRAMER.
SUBCELLULAR LOCATION: CYTOPLASMIC.
MISCELLANEOUS: KM = 3.5 X 10(-3) M.
MISCELLANEOUS: E.COLI CONTAINS TWO L-ASPARAGINASE ISOENZYMES:
L-ASPARAGINASE I, A LOW-AFFINITY ENZYME LOCATED IN THE CYTOPLASM,
AND L-ASPARAGINASE II, A HIGH-AFFINITY SECRETED ENZYME.
SIMILARITY: BELONGS TO THE ASPARAGINASE 1 FAMILY.
|
| | ydjB | b1768 | orf, hypothetical protein |
EG11135 |
CATALYTIC ACTIVITY: NICOTINAMIDE + H(2)O = NICOTINATE + NH(3).
PATHWAY: PYRIDINE NUCLEOTIDE CYCLE.
SIMILARITY: TO YEAST YGL037C.
|
| 1.085873 | - | b2809 | b2809 | orf, hypothetical protein |
EG13081 |
SUBCELLULAR LOCATION: ATTACHED TO THE MEMBRANE BY A LIPID
ANCHOR (POTENTIAL).
SIMILARITY: STRONG, TO E.COLI YGDR.
|
| 1.076904 | + | b1995 | b1995 | orf, hypothetical protein |
|
|
| 1.067266 | + | b1643 | b1643 | orf, hypothetical protein |
EG13943 |
|
| | b1644 | b1644 | putative membrane protein |
EG13944 |
|
| | b1645 | b1645 | orf, hypothetical protein |
|
|
| 1.054532 | + | b2710 | b2710 | putative flavodoxin |
|
|
| | ygbD | b2711 | putative oxidoreductase |
EG12450 |
COFACTOR: FAD (BY SIMILARITY).
SIMILARITY: STRONG, TO FERREDOXINS/ADRENODOXINS REDUCTASES.
|
| 0.984500 | - | b0955 | b0955 | putative ATP-dependent protease |
EG13718 |
SIMILARITY: BELONGS TO PEPTIDASE FAMILY S16; ALSO KNOWN AS THE LON
FAMILY OF ATP-DEPENDENT PROTEASES. LACKS THE ATP-BINDING DOMAIN.
STRONG, TO H.HINFLUENZAE HI1324.
|
| | fabA | b0954 | beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase |
EG10273 |
FUNCTION: NECESSARY FOR THE INTRODUCTION OF CIS UNSATURATION INTO
FATTY ACIDS. CATALYZED THE DEHYDRATION OF (3R)-3-HYDROXYDECANOYL-
ACP TO E-(2)-DECENOYL-ACP AND THEN ITS ISOMERIZATION TO
Z-(3)-DECENOYL-ACP.
CATALYTIC ACTIVITY: (3R)-3-HYDROXYDECANOYL-[ACYL-CARRIER PROTEIN]
= 2,3-DECENOYL-[ACYL-CARRIER PROTEIN] OR 3,4-DECENOYL-[ACYL-
CARRIER PROTEIN] + H(2)O.
PATHWAY: KEY STEP IN THE ANAEROBIC PATHWAY OF UNSATURATED FATTY
ACID SYNTHESIS IN BACTERIA.
SUBUNIT: HOMODIMER.
SUBCELLULAR LOCATION: CYTOPLASMIC.
SIMILARITY: BELONGS TO THE THIOESTER DEHYDRATASE FAMILY.
|
| 0.962562 | + | b1843 | b1843 | orf, hypothetical protein |
EG14030 |
|
| | b1844 | b1844 | orf, hypothetical protein |
EG14031 |
FUNCTION: CAPABLE OF DEGRADING BOTH SINGLE-STRAND AND DOUBLE-
STRAND DNA WITH 3' TO 5' POLARITY. HAS HIGHER AFFINITY FOR SSDNA
ENDS THAN FOR DSDNA. MAY FACILITATE RECOMBINATIONAL REPAIR BY PRE-
SYNAPTIC AND/OR POST-SYNAPTIC DNA DEGRADATION.
COFACTOR: MAGNESIUM-DEPENDENT.
|
| 0.930233 | + | secA | b0098 | preprotein translocase; secretion protein |
EG10936 |
FUNCTION: INVOLVED IN PROTEIN EXPORT. INTERACTS WITH THE SECY/SECE
SUBUNITS. SECA HAS A CENTRAL ROLE IN COUPLING THE HYDROLYSIS OF
ATP TO THE TRANSFER OF PRE-SECRETORY PERIPLASMIC AND OUTER
MEMBRANE PROTEINS ACROSS THE MEMBRANE.
SUBUNIT: PART OF THE PROKARYOTIC PROTEIN TRANSLOCATION APPARATUS
WHICH COMPRISE SECA, SECB, SECD, SECE, SECF, SECG AND SECY.
SUBCELLULAR LOCATION: CYTOPLASMIC SIDE OF PLASMA MEMBRANE.
SIMILARITY: BELONGS TO THE SECA FAMILY.
|
| | mutT | b0099 | 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions |
EG10626 |
FUNCTION: INVOLVED IN THE GO SYSTEM RESPONSIBLE FOR REMOVING AN
OXIDATIVELY DAMAGED FORM OF GUANINE (7,8-DIHYDRO-8-OXOGUANINE)
FROM DNA AND THE NUCLEOTIDE POOL. 8-OXO-DGTP IS INSERTED OPPOSITE
DA AND DC RESIDUES OF TEMPLATE DNA WITH ALMOST EQUAL EFFICIENCY
THUS LEADING TO A.T TO G.C TRANSVERSIONS. MUTT SPECIFICALLY
DEGRADES 8-OXO-DGTP TO THE MONOPHOSPHATE.
CATALYTIC ACTIVITY: 8-OXO-DGTP + H(2)O = 8-OXO-DGMP +
PYROPHOSPHATE.
COFACTOR: REQUIRES MAGNESIUM.
SUBUNIT: MONOMER.
SIMILARITY: BELONGS TO THE NUDIX HYDROLASE FAMILY.
|
| 0.927162 | + | ispB | b3187 | octaprenyl diphosphate synthase |
EG10017 |
FUNCTION: SUPPLIES OCTAPRENYL DIPHOSPHATE, THE PRECURSOR FOR THE
SIDE CHAIN OF THE ISOPRENOID QUINONES UBIQUINONE AND MENAQUINONE.
SIMILARITY: BELONGS TO THE FPP/GGPP SYNTHETASES FAMILY.
|
| 0.900156 | + | yicK | b3659 | two-module transport protein |
EG11687 |
FUNCTION: INVOLVED IN THE EFFLUX OF SUGARS. THE PHYSIOLOGICAL ROLE
MAY BE THE DETOXIFICATION OF NON-METABOLIZABLE SUGAR ANALOGS.
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. INNER MEMBRANE
(PROBABLE).
SIMILARITY: BELONGS TO THE SET FAMILY OF TRANSPORTERS.
|
| | yicL | b3660 | putative permease transporter |
EG11688 |
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN (PROBABLE).
SIMILARITY: BELONGS TO THE EAMA TRANSPORTER FAMILY.
|
| 0.875083 | - | gadA | b3517 | glutamate decarboxylase isozyme |
EG50009 |
FUNCTION: CATALYZES THE PRODUCTION OF GABA.
CATALYTIC ACTIVITY: L-GLUTAMATE = 4-AMINOBUTANOATE + CO(2).
COFACTOR: PYRIDOXAL PHOSPHATE.
SUBUNIT: HOMOHEXAMER.
SIMILARITY: BELONGS TO GROUP II DECARBOXYLASES (DDC, GAD, HDC AND
TYRDC).
DATABASE: NAME=Worthington enzyme manual;
WWW="http://www.worthington-biochem.com/manual/G/GLDP.html".
|
| 0.874215 | + | b1601 | b1601 | putative transport protein |
EG13928 |
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN (POTENTIAL).
SIMILARITY: BELONGS TO THE UPF0118 (PERM) FAMILY.
|
| 0.866325 | + | yi81_3 | b2394 | IS186 hypothetical protein |
|
|
| 0.856668 | + | ygeG | b2851 | orf, hypothetical protein |
EG13037 |
SIMILARITY: TO SHIGELLA AND YERSINIA PLASMIDS IPPI AND LCRH.
|
| 0.850444 | - | fhuE | b1102 | outer membrane receptor for ferric iron uptake |
EG10306 |
FUNCTION: REQUIRED FOR THE UPTAKE OF IRON(III) VIA COPROGEN,
FERRIOXAMINE B, AND RHODOTORULIC ACID.
SUBCELLULAR LOCATION: OUTER MEMBRANE.
INDUCTION: FOR INDUCTION THE TONB AND THE EXBB PROTEIN HAVE TO
BE ACTIVE.
SIMILARITY: LOCAL TO OTHER TONB-DEPENDENT RECEPTOR PROTEINS.
|
| 0.849753 | + | b0833 | b0833 | orf, hypothetical protein |
EG13476 |
SIMILARITY: CONTAINS 1 DUF2 DOMAIN.
|
| | b0834 | b0834 | orf, hypothetical protein |
|
|
| 0.846620 | - | napF | b2208 | ferredoxin-type protein: electron transfer |
EG12068 |
FUNCTION: INVOLVED IN ELECTRON TRANSFER.
SIMILARITY: THE IRON-SULFUR CENTERS ARE SIMILAR TO THOSE OF
'BACTERIAL-TYPE' 4FE-4S FERREDOXINS.
|
| | napD | b2207 | orf, hypothetical protein |
EG12143 |
FUNCTION: PLAYS A ROLE IN THE CORRECT ASSEMBLY OF SUBUNITS OF THE
PERIPLASMIC NAPAB ENZYME.
SUBCELLULAR LOCATION: CYTOPLASMIC (POTENTIAL).
|
| | napA | b2206 | probable nitrate reductase 3 |
EG12067 |
FUNCTION: LARGE SUBUNIT OF THE PERIPLASMIC NITRATE REDUCTASE
(NAP). ONLY EXPRESSED AT HIGH LEVELS DURING AEROBIC GROWTH. NAPAB
COMPLEX RECEIVES ELECTRONS FROM THE MEMBRANE-ANCHORED TETRAHEME
NAPC PROTEIN, THUS ALLOWING ELECTRON FLOW BETWEEN MEMBRANE AND
PERIPLASM. ESSENTIAL FUNCTION FOR NITRATE ASSIMILATION AND MAY
HAVE A ROLE IN ANAEROBIC METABOLISM (BY SIMILARITY).
CATALYTIC ACTIVITY: NITRITE + ACCEPTOR = NITRATE + REDUCED
ACCEPTOR.
COFACTOR: MOLYBDENUM (MOLYBDOPTERIN); MAY BIND A 4FE-4S CLUSTER
(BY SIMILARITY).
SUBCELLULAR LOCATION: PERIPLASMIC (POTENTIAL).
SIMILARITY: BELONGS TO THE PROKARYOTIC MOLYBDOPTERIN-CONTAINING
OXIDOREDUCTASE FAMILY. NASA/NAPA/NARB SUBFAMILY.
CAUTION: REF.1 SEQUENCE DIFFERS FROM THAT SHOWN DUE TO FRAMESHIFTS
IN POSITIONS 19 AND 27.
|
| | napG | b2205 | ferredoxin-type protein: electron transfer |
EG12064 |
FUNCTION: INVOLVED IN ELECTRON TRANSFER.
SIMILARITY: THE IRON-SULFUR CENTERS ARE SIMILAR TO THOSE OF
'BACTERIAL-TYPE' 4FE-4S FERREDOXINS.
CAUTION: REF.1 SEQUENCE DIFFERS FROM THAT SHOWN DUE TO A
FRAMESHIFT IN POSITION 145.
|
| | napH | b2204 | ferredoxin-type protein: electron transfer |
EG12062 |
FUNCTION: INVOLVED IN ELECTRON TRANSFER.
SIMILARITY: THE IRON-SULFUR CENTERS ARE SIMILAR TO THOSE OF
'BACTERIAL-TYPE' 4FE-4S FERREDOXINS.
|
| | napB | b2203 | cytochrome c-type protein |
EG12061 |
FUNCTION: SMALL SUBUNIT OF THE PERIPLASMIC NITRATE REDUCTASE
(NAP). ONLY EXPRESSED AT HIGH LEVELS DURING AEROBIC GROWTH. NAPAB
COMPLEX RECEIVES ELECTRONS FROM THE MEMBRANE-ANCHORED TETRAHEME
NAPC PROTEIN, THUS ALLOWING ELECTRON FLOW BETWEEN MEMBRANE AND
PERIPLASM. ESSENTIAL FUNCTION FOR NITRATE ASSIMILATION AND MAY
HAVE A ROLE IN ANAEROBIC METABOLISM (BY SIMILARITY).
SUBUNIT: HETERODIMER OF A CATALYTIC SUBUNIT AND A CYTOCHROME C (BY
SIMILARITY).
SUBCELLULAR LOCATION: PERIPLASMIC (POTENTIAL).
PTM: BINDS TWO HEME GROUPS PER MOLECULE (POTENTIAL).
SIMILARITY: STRONG, TO OTHER BACTERIAL NAPB.
|
| | napC | b2202 | cytochrome c-type protein |
EG12060 |
FUNCTION: MEDIATES ELECTRON FLOW FROM QUINONES TO THE NAPAB
COMPLEX.
SUBCELLULAR LOCATION: MEMBRANE-ANCHORED. PERIPLASMIC (POTENTIAL).
PTM: BINDS FOUR HEME GROUPS PER MOLECULE (POTENTIAL).
SIMILARITY: TO OTHER NAPC AND TO P.STUTZERI NIRT.
|
| | ccmA | b2201 | ATP binding protein of heme exporter A |
EG12059 |
FUNCTION: REQUIRED FOR THE EXPORT OF HEME TO THE PERIPLASM FOR THE
BIOGENESIS OF C-TYPE CYTOCHROMES.
SUBCELLULAR LOCATION: INNER MEMBRANE-ASSOCIATED (POTENTIAL).
SIMILARITY: BELONGS TO THE ATP-BINDING TRANSPORT PROTEIN FAMILY
(ABC TRANSPORTERS).
|
| | ccmB | b2200 | heme exporter protein B, cytochrome c-type biogenesis protein |
EG12058 |
FUNCTION: REQUIRED FOR THE EXPORT OF HEME TO THE PERIPLASM FOR THE
BIOGENESIS OF C-TYPE CYTOCHROMES.
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. INNER MEMBRANE
(PROBABLE).
SIMILARITY: BELONGS TO THE CCMB/CYCW/HELB FAMILY.
|
| | ccmC | b2199 | heme exporter protein C |
EG12057 |
FUNCTION: REQUIRED FOR THE EXPORT OF HEME TO THE PERIPLASM FOR THE
BIOGENESIS OF C-TYPE CYTOCHROMES.
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. INNER MEMBRANE
(PROBABLE).
SIMILARITY: BELONGS TO THE CCMC/CYCZ/HELC FAMILY.
|
| | ccmD | b2198 | heme exporter protein C |
EG12169 |
FUNCTION: REQUIRED FOR THE EXPORT OF HEME TO THE PERIPLASM FOR THE
BIOGENESIS OF C-TYPE CYTOCHROMES (POTENTIAL).
SIMILARITY: BELONGS TO THE CCMD/CYCX/HELD FAMILY.
|
| | ccmE | b2197 | cytochrome c biogenesis, possible subunit of a heme lyase |
EG12055 |
FUNCTION: REQUIRED FOR THE BIOGENESIS OF C-TYPE CYTOCHROMES.
POSSIBLE SUBUNIT OF A HEME LYASE.
SUBCELLULAR LOCATION: MOSTLY PERIPLASMIC; ANCHORED IN THE INNER
MEMBRANE (POTENTIAL).
SIMILARITY: BELONGS TO THE CCME/CYCJ FAMILY.
|
| | ccmF | b2196 | cytochrome c-type biogenesis protein |
EG12054 |
FUNCTION: REQUIRED FOR THE BIOGENESIS OF C-TYPE CYTOCHROMES.
POSSIBLE SUBUNIT OF A HEME LYASE.
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. INNER MEMBRANE
(POTENTIAL).
SIMILARITY: BELONGS TO THE CCMF/CYCK/CCL1/NRFE/CCSA FAMILY.
|
| | dsbE | b2195 | disulfide oxidoreductase (in biogenesis of cytochrome c? |
EG12053 |
FUNCTION: REQUIRED FOR DISULFIDE BOND FORMATION IN SOME
PERIPLASMIC PROTEINS. COULD ALSO ACT AS A DISULFIDE OXIDOREDUCTASE
IN CYTOCHROMES C BIOGENESIS. THE CYSTEINES OF APOCYTOCHROMES C
MUST BE IN THE REDUCED STATE FOR COVALENT LINKAGE BETWEEN THE TWO
MOIETIES TO OCCUR.
SUBCELLULAR LOCATION: PERIPLASMIC.
SIMILARITY: BELONGS TO THE THIOREDOXIN FAMILY; DSBE SUBFAMILY.
|
| | ccmH | b2194 | possible subunit of heme lyase |
EG12052 |
FUNCTION: MAY BE REQUIRED FOR THE BIOGENESIS OF C-TYPE
CYTOCHROMES. POSSIBLE SUBUNIT OF A HEME LYASE.
SUBCELLULAR LOCATION: PERIPLASMIC (PROBABLE).
SIMILARITY: BELONGS TO THE CCMH/CYCL/CCL2/NRFF FAMILY.
|
| 0.845100 | - | ygaA | b2709 | putative 2-component transcriptional regulator |
EG12108 |
SIMILARITY: THE N-TERMINAL REGION IS SIMILAR TO THAT OF OTHER
REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEMS.
SIMILARITY: THE CENTRAL REGION CONTAINS A SIGMA-54 FACTOR
INTERACTION ATP-BINDING DOMAIN.
|
| 0.825093 | - | ydaQ | b1346 | orf, hypothetical protein |
EG13359 |
|
| | b1345 | b1345 | putative transposase |
EG13358 |
FUNCTION: INTEGRASE IS NECESSARY FOR INTEGRATION OF THE PHAGE INTO
THE HOST GENOME BY SITE-SPECIFIC RECOMBINATION. IN CONJUNCTION
WITH EXCISIONASE, INTEGRASE IS ALSO NECESSARY FOR EXCISION OF THE
PROPHAGE FROM THE HOST GENOME (BY SIMILARITY).
SIMILARITY: BELONGS TO THE "PHAGE" INTEGRASE FAMILY.
|
| | ydaO | b1344 | orf, hypothetical protein |
EG13357 |
SIMILARITY: STRONG, TO H.INFLUENZAE HI1371.1.
|
| 0.788957 | + | yjbI | b4038 | orf, hypothetical protein |
EG11927 |
|
| | ubiC | b4039 | chorismate lyase |
EG11369 |
CATALYTIC ACTIVITY: CHORISMATE = 4-HYDROXYBENZOATE + PYRUVATE.
PATHWAY: FIRST STEP IN UBIQUINONE BIOSYNTHESIS.
SUBUNIT: MONOMER.
SUBCELLULAR LOCATION: CYTOPLASMIC.
|
| | ubiA | b4040 | 4-hydroxybenzoate-octaprenyltransferase |
EG11370 |
FUNCTION: SYNTHESIS OF 3-OCTAPRENYL-4-HYDROXYBENZOATE.
CATALYTIC ACTIVITY: 4-HYDROXYBENZOATE + FARNESYLFARNESYLGERANIOL
= 3-OCTAPRENYL-4-HYDROXYBENZOATE.
COFACTOR: REQUIRES MAGNESIUM.
PATHWAY: SECOND STEP IN UBIQUINONE BIOSYNTHESIS.
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. INNER MEMBRANE.
SIMILARITY: BELONGS TO THE UBIA PRENYLTRANSFERASE FAMILY.
|
| 0.780166 | + | ybeU | b0648 | putative tRNA ligase |
EG13651 |
SIMILARITY: STRONG, TO E.COLI YBER.
|
| | ybeV | b0649 | orf, hypothetical protein |
EG13652 |
SIMILARITY: CONTAINS 1 J DOMAIN.
SIMILARITY: STRONG, TO E.COLI YBES.
|
| 0.734779 | - | yjbK | b4046 | putative regulator |
EG11929 |
FUNCTION: ACTS AS A NEGATIVE CONTROLLING ELEMENT, EMPLOYING ZN(2+)
AS A COFACTOR TO BIND THE OPERATOR OF THE REPRESSED GENES
(ZNUACB).
SIMILARITY: BELONGS TO THE FUR FAMILY.
|
| 0.729596 | + | yhcN | b3238 | orf, hypothetical protein |
EG12820 |
SIMILARITY: BELONGS TO THE YAHO/YBIJ/YBIM/YCFR/YHCN FAMILY.
|