u_gen_hits3
Gene list
Wadsworth clusters
Rajewsky clusters
Score
Distance to operon
Sense
Operon structure
0.993006
185
-
nrdD b4238
0.992360
96
+
nrdA b2234
0.985939
101
+
nrdA b2234
0.985119
190
-
nrdD b4238
0.940302
159
-
nrdD b4238
0.926762
181
+
yaiB b0382 .. 32 .. phoA b0383 .. 101 .. psiF b0384 .. 102 .. yaiC b0385
0.926575
73
-
yiaW b3587 .. 6 .. yiaV b3586
0.851933
26
+
lpp b1677
0.848693
269
+
gltF b3214
0.806160
154
-
nrdD b4238
0.785153
78
-
yiaW b3587 .. 6 .. yiaV b3586
0.765997
278
+
sdhC b0721 .. -6 .. sdhD b0722 .. 0 .. sdhA b0723 .. 16 .. sdhB b0724 .. 59 .. b0725 b0725 .. -18 .. sucA b0726 .. 15 .. sucB b0727
0.714849
176
+
yaiB b0382 .. 32 .. phoA b0383 .. 101 .. psiF b0384 .. 102 .. yaiC b0385
0.697631
37
+
b1643 b1643 .. -39 .. b1644 b1644 .. 0 .. b1645 b1645
0.677632
97
+
nrdH b2673 .. -3 .. nrdI b2674 .. -27 .. nrdE b2675 .. 10 .. nrdF b2676
0.672168
52
+
b1527 b1527
0.669407
123
+
nrdH b2673 .. -3 .. nrdI b2674 .. -27 .. nrdE b2675 .. 10 .. nrdF b2676
0.652907
210
+
b1689 b1689 .. 100 .. b1690 b1690
0.646568
119
+
yecD b1867 .. -3 .. yecE b1868 .. 23 .. yecN b1869 .. 41 .. yecO b1870 .. -3 .. yecP b1871
0.634157
264
+
gltF b3214
0.632836
10
-
b2998 b2998
0.625006
233
+
proV b2677 .. -7 .. proW b2678 .. 58 .. proX b2679
0.624958
168
+
osmC b1482
0.613440
163
-
htpX b1829
0.596004
297
-
ybgD b0719 .. 51 .. ybgQ b0718 .. 15 .. ybgP b0717 .. -30 .. ybgO b0716 .. 107 .. abrB b0715
0.595473
158
-
htpX b1829
0.591234
51
+
b1587 b1587 .. 58 .. b1588 b1588 .. 11 .. b1589 b1589 .. 2 .. b1590 b1590 .. 34 .. b1591 b1591 .. 135 .. b1592 b1592
0.579067
374
-
b2339 b2339 .. 82 .. yfcU b2338 .. 13 .. b2337 b2337 .. 20 .. yfcS b2336 .. 0 .. b2335 b2335 .. -3 .. b2334 b2334 .. -3 .. b2333 b2333 .. -13 .. b2332 b2332
0.577971
1
+
atoS b2219 .. -3 .. atoC b2220
0.571403
253
+
kdtA b3633 .. 8 .. kdtB b3634
0.570021
5
-
b2998 b2998
0.566181
265
-
gcvT b2905 .. 24 .. gcvH b2904 .. 119 .. gcvP b2903
0.556866
63
+
yabH b0055
0.547133
162
+
ybjM b0848
0.538190
289
+
ydiQ b1697 .. 20 .. ydiR b1698 .. 56 .. ydiS b1699 .. -3 .. ydiT b1700 .. 3 .. ydiD b1701
0.513353
75
-
speB b2937
0.501586
127
+
ilvL b3766 .. 140 .. ilvG_1 b3767
0.480944
34
+
dnaK b0014 .. 89 .. dnaJ b0015 .. 147 .. yi81_1 b0016
0.478993
286
+
acrE b3265 .. 12 .. acrF b3266
0.475161
12
+
yccE b1001
0.460602
67
+
yecI b1902 .. 16 .. b1903 b1903
0.458447
258
+
kdtA b3633 .. 8 .. kdtB b3634
0.455087
41
+
yhcN b3238
0.450877
154
+
slp b3506
0.450596
29
+
dnaK b0014 .. 89 .. dnaJ b0015 .. 147 .. yi81_1 b0016
0.440152
445
+
gltF b3214
0.426159
70
-
speB b2937
0.425893
173
+
osmC b1482
0.416518
116
-
kbl b3617 .. 10 .. tdh b3616
0.410176
69
-
recA b2699 .. 69 .. oraA b2698 .. 129 .. alaS b2697
0.403067
104
+
ygiL b3043
0.402005
75
+
emrR b2684 .. 127 .. emrA b2685 .. 17 .. emrB b2686
0.397392
42
+
b1643 b1643 .. -39 .. b1644 b1644 .. 0 .. b1645 b1645
0.391197
77
+
yfeN b2408
0.372061
27
+
argR b3237
0.368791
106
-
b2374 b2374 .. 54 .. b2373 b2373 .. 70 .. b2372 b2372 .. 35 .. yfdE b2371
0.368436
215
+
b1689 b1689 .. 100 .. b1690 b1690
0.365968
82
+
yfeN b2408
0.364634
102
+
yfbL b2271 .. 103 .. yfbM b2272
0.357823
78
-
ybhC b0772
0.356358
41
-
idnR b4264 .. 78 .. yjgR b4263
0.345419
17
+
yccE b1001
0.344324
381
+
b2654 b2654 .. 19 .. b2655 b2655 .. 5 .. b2656 b2656
0.328646
469
+
ybfM b0681 .. 50 .. ybfN b0682
0.325547
386
+
b2654 b2654 .. 19 .. b2655 b2655 .. 5 .. b2656 b2656
0.322887
91
+
crcA b0622
0.320426
72
+
yecI b1902 .. 16 .. b1903 b1903
0.317986
37
+
pckA b3403
0.313517
124
+
yecD b1867 .. -3 .. yecE b1868 .. 23 .. yecN b1869 .. 41 .. yecO b1870 .. -3 .. yecP b1871
0.313479
352
-
cspI b1552
0.305042
132
+
ilvL b3766 .. 140 .. ilvG_1 b3767
0.304959
36
+
yhcN b3238
0.302928
233
+
ycbQ b0938 .. 83 .. ycbR b0939 .. 25 .. ycbS b0940 .. -9 .. b0941 b0941 .. 12 .. b0942 b0942 .. -40 .. b0943 b0943 .. -34 .. ycbF b0944 .. 111 .. pyrD b0945 .. 138 .. ycbW b0946
0.302756
26
+
ptsH b2415 .. 45 .. ptsI b2416 .. 41 .. crr b2417
0.302439
80
+
b1368 b1368 .. -24 .. b1369 b1369
0.300587
572
+
ykgL b0295
0.300557
25
+
yhfL b3369
0.298606
46
+
hyfA b2481 .. 0 .. hyfB b2482 .. -10 .. hyfC b2483 .. 17 .. hyfD b2484 .. 12 .. hyfE b2485 .. 5 .. hyfF b2486 .. -10 .. hyfG b2487 .. 10 .. hyfH b2488 .. -3 .. hyfI b2489 .. -70 .. b2490 b2490 .. 51 .. hyfR b2491 .. 22 .. focB b2492
0.297707
130
+
ilvL b3766 .. 140 .. ilvG_1 b3767
0.292125
568
+
argG b3172
0.288231
473
-
atpI b3739 .. 9 .. atpB b3738 .. 47 .. atpE b3737 .. 62 .. atpF b3736 .. 15 .. atpH b3735 .. 13 .. atpA b3734 .. 51 .. atpG b3733 .. 27 .. atpD b3732 .. 21 .. atpC b3731
0.284576
51
+
yhfM b3370 .. 0 .. yhfN b3371 .. -37 .. yhfO b3372 .. 65 .. yhfP b3373 .. -3 .. yhfQ b3374 .. 34 .. yhfR b3375
0.282706
56
+
yhfM b3370 .. 0 .. yhfN b3371 .. -37 .. yhfO b3372 .. 65 .. yhfP b3373 .. -3 .. yhfQ b3374 .. 34 .. yhfR b3375
0.281910
27
-
mfd b1114 .. 144 .. ycfS b1113
0.276971
379
-
b2339 b2339 .. 82 .. yfcU b2338 .. 13 .. b2337 b2337 .. 20 .. yfcS b2336 .. 0 .. b2335 b2335 .. -3 .. b2334 b2334 .. -3 .. b2333 b2333 .. -13 .. b2332 b2332
0.270277
260
-
gcvT b2905 .. 24 .. gcvH b2904 .. 119 .. gcvP b2903
0.269889
392
+
eaeH b0297 .. 38 .. b0298 b0298 .. -3 .. tra5_5 b0299
0.269631
83
-
ybhC b0772
0.267736
450
+
gltF b3214
0.267350
45
+
ybhH b0769 .. 76 .. ybhI b0770
0.264595
255
-
b2339 b2339 .. 82 .. yfcU b2338 .. 13 .. b2337 b2337 .. 20 .. yfcS b2336 .. 0 .. b2335 b2335 .. -3 .. b2334 b2334 .. -3 .. b2333 b2333 .. -13 .. b2332 b2332
0.261161
30
-
recA b2699 .. 69 .. oraA b2698 .. 129 .. alaS b2697
0.257872
334
+
mtlA b3599
0.257773
92
+
nrdH b2673 .. -3 .. nrdI b2674 .. -27 .. nrdE b2675 .. 10 .. nrdF b2676
0.255913
363
-
b2648 b2648
0.255804
227
+
prpB b0331
0.253198
238
+
proV b2677 .. -7 .. proW b2678 .. 58 .. proX b2679
0.249116
82
+
ygiX b3025 .. -3 .. ygiY b3026
0.247592
15
+
slp b3506
0.244613
279
+
rpiB b4090