Score |
Strand | Gene name |
Blattner ID |
Description |
EcoCyc link |
SwissProt comment |
| 9.120345 | + | b2088 | b2088 | orf, hypothetical protein |
 |
|
| | tra5_4 | b2089 | IS3 putative transposase |
|
|
| 9.112237 | - | b1027 | b1027 | orf, hypothetical protein |
|
|
| | tra5_3 | b1026 | IS3 putative transposase |
EG40006 |
FUNCTION: INVOLVED IN THE TRANSPOSITION OF THE INSERTION
SEQUENCE IS3.
SIMILARITY: BELONGS TO THE IS3/IS150/IS904 FAMILY OF TRANSPOSASES.
|
| 9.066209 | - | b0373 | b0373 | putative factor |
|
|
| | tra5_1 | b0372 | IS3 putative transposase |
|
|
| 8.901865 | + | b0540 | b0540 | orf, hypothetical protein |
|
|
| | tra5_2 | b0541 | IS3 putative transposase |
|
|
| | b0542 | b0542 | orf, hypothetical protein |
|
|
| | emrE | b0543 | methylviologen resistance |
EG10629 |
FUNCTION: MULTIDRUG TRANSPORTER. CONFERS RESISTANCE TO A WIDE
RANGE OF TOXIC COMPOUNDS BY REMOVING THEM FOR THE CELLS. THE
EFFLUX IS COUPLED TO AN INFLUX OF PROTONS. PROBABLY PREVENTS THE
INCORPORATION OF METHYL VIOLOGEN INTO CELLS. INVOLVED IN ETHIDIUM
BROMIDE EFFLUX.
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. INNER MEMBRANE
(PROBABLE).
SIMILARITY: BELONGS TO THE SMALL MULTIDRUG RESISTANCE (SMR)
PROTEIN FAMILY.
|
| 8.860114 | + | b1028 | b1028 | orf, hypothetical protein |
|
|
| | ycdU | b1029 | orf, hypothetical protein |
EG13867 |
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN (POTENTIAL).
|
| | b1030 | b1030 | orf, hypothetical protein |
|
|
| | ycdV | b1031 | putative ribosomal protein |
|
|
| 8.591266 | - | gatR_1 | b2087 | split galactitol utilization operon repressor, interrupted |
EG12162 |
FUNCTION: REPRESSOR OF THE GAT OPERON FOR GALACTICOL TRANSPORT
AND METABOLISM.
SIMILARITY: BELONGS TO THE DEOR FAMILY OF TRANSCRIPTIONAL
REGULATORS.
CAUTION: IN WILD-TYPE E.COLI K12, AN INSERTION SEQUENCE (IS3E)
IS INSERTED IN THE GATR GENE IN POSITION 102.
CAUTION: REF.3 AND REF.4 SEQUENCES DIFFER FROM THAT SHOWN IN
POSITIONS 115 TO 118 DUE TO FRAMESHIFTS.
|
| 8.371277 | + | yaiU | b0374 | putative flagellin structural protein |
EG13606 |
|
| | yaiV | b0375 | orf, hypothetical protein |
EG13607 |
|
| 0.662321 | + | sieB | b1353 | phage superinfection exclusion protein |
EG12157 |
SIMILARITY: STRONG, TO E.COLI YDFA.
|
| | b1354 | b1354 | orf, hypothetical protein |
|
|
| 0.360647 | + | b1592 | b1592 | putative chloride channel |
|
|
| 0.336494 | + | fliD | b1924 | flagellar biosynthesis; filament capping protein; enables filament assembly |
EG10841 |
FUNCTION: REQUIRED FOR THE MORPHOGENESIS AND FOR THE ELONGATION OF
THE FLAGELLAR FILAMENT BY FACILITATING POLYMERIZATION OF THE
FLAGELLIN MONOMERS AT THE TIP OF GROWING FILAMENT.
SUBCELLULAR LOCATION: FLAGELLAR.
SIMILARITY: BELONGS TO THE HAP2 FILAMENT CAP PROTEIN FAMILY.
|
| | fliS | b1925 | flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) |
EG11388 |
FUNCTION: NOT KNOWN.
SIMILARITY: BELONGS TO THE FLIS FAMILY.
|
| | fliT | b1926 | flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) |
EG11389 |
FUNCTION: NOT KNOWN.
SIMILARITY: BELONGS TO THE FLIT FAMILY.
|
| | amyA | b1927 | cytoplasmic alpha-amylase |
EG11387 |
CATALYTIC ACTIVITY: ENDOHYDROLYSIS OF 1,4-ALPHA-GLUCOSIDIC
LINKAGES IN OLIGOSACCHARIDES AND POLYSACCHARIDES.
SUBCELLULAR LOCATION: CYTOPLASMIC.
SIMILARITY: BELONGS TO FAMILY 13 OF GLYCOSYL HYDROLASES, ALSO
KNOWN AS THE ALPHA-AMYLASE FAMILY.
|
| 0.309438 | - | uvrY | b1914 | putative 2-component transcriptional regulator |
EG11140 |
SIMILARITY: TO OTHER BACTERIAL REGULATORY PROTEINS INVOLVED IN
SIGNAL TRANSDUCTION.
SIMILARITY: BELONGS TO THE LUXR/UHPA FAMILY OF TRANSCRIPTIONAL
REGULATORS.
|
| | uvrC | b1913 | excinuclease ABC, subunit C; repair of UV damage to DNA |
EG11063 |
FUNCTION: THE ABC EXCISION NUCLEASE IS A DNA REPAIR ENZYME THAT
CATALYZES THE EXCISION REACTION OF UV-DAMAGED NUCLEOTIDE SEGMENTS
PRODUCING OLIGOMERS HAVING THE MODIFIED BASE(S). ATTACHES TO THE
UVRA-UVRB COMPLEX, DISPLACING UVRA, AND THE DAMAGED DNA STRAND IS
NICKED ON BOTH SIDES OF THE DAMAGED SITE.
SUBUNIT: CONSISTS OF THREE SUBUNITS; UVRA, UVRB AND UVRC.
SUBCELLULAR LOCATION: CYTOPLASMIC.
SIMILARITY: BELONGS TO THE UVRC FAMILY.
|
| | pgsA | b1912 | phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase |
EG10706 |
FUNCTION: THIS PROTEIN CATALYZES THE COMMITTED STEP TO THE
SYNTHESIS OF THE ACIDIC PHOSPHOLIPIDS.
CATALYTIC ACTIVITY: CDP-DIACYLGLYCEROL + GLYCEROL-3-PHOSPHATE =
CMP + 3-(3-PHOSPHATIDYL)-GLYCEROL 1-PHOSPHATE.
PATHWAY: BIOSYNTHESIS OF ACIDIC PHOSPHOLIPIDS.
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN.
SIMILARITY: BELONGS TO THE CDP-ALCOHOL PHOSPHATIDYLTRANSFERASE
CLASS-I FAMILY.
|
| 0.285102 | + | pyrF | b1281 | orotidine-5'-phosphate decarboxylase |
EG10809 |
CATALYTIC ACTIVITY: OROTIDINE-5'-PHOSPHATE = UMP + CO(2).
PATHWAY: SIXTH AND LAST STEP IN THE BIOSYNTHESIS OF PYRIMIDINES.
SUBUNIT: HOMODIMER.
SIMILARITY: BELONGS TO THE OMP DECARBOXYLASE FAMILY.
|
| | yciH | b1282 | orf, hypothetical protein |
EG11128 |
SIMILARITY: BELONGS TO THE SUI1 FAMILY.
|
| 0.204644 | + | pgpB | b1278 | non-essential phosphatidylglycerophosphate phosphatase, membrane bound |
EG10705 |
FUNCTION: HYDROLYZES PHOSPHATIDYLGLYCEROPHOSPHATE, PHOSPHATIDIC
ACID, AND LYSOPHOSPHATIDIC ACID; THE PATTERN OF ACTIVITIES VARIES
ACCORDING TO SUBCELLULAR LOCATION.
CATALYTIC ACTIVITY: PHOSPHATIDYLGLYCEROPHOSPHATE + H(2)O =
PHOSPHATIDYLGLYCEROL + ORTHOPHOSPHATE.
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. INNER AND OUTER
MEMBRANES.
|
| | yciS | b1279 | orf, hypothetical protein |
EG13904 |
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN (POTENTIAL).
SIMILARITY: TO H.INFLUENZAE HI1222.
|
| | yciM | b1280 | putative heat shock protein |
EG12691 |
SIMILARITY: STRONG, TO H.INFLUENZAE HI1223.
|
| 0.202124 | + | ychK | b1234 | orf, hypothetical protein |
EG12120 |
SIMILARITY: BELONGS TO THE UPF0028 (SWS) FAMILY.
|
| | hnr | b1235 | Hnr protein |
EG12121 |
SIMILARITY: THE N-TERMINAL REGION IS SIMILAR TO THAT OF OTHER
REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEMS.
|
| 0.186297 | + | b1085 | b1085 | orf, hypothetical protein |
|
|
| | yceC | b1086 | orf, hypothetical protein |
EG11118 |
FUNCTION: RESPONSIBLE FOR SYNTHESIS OF PSEUDOURIDINE FROM URACIL
AT POSITIONS 955, 2504 AND 2580 IN 23S RIBOSOMAL RNA.
CATALYTIC ACTIVITY: URACIL + D-RIBOSE 5-PHOSPHATE = PSEUDOURIDINE
5'-PHOSPHATE + H(2)O.
SIMILARITY: BELONGS TO THE RLU FAMILY OF PSEUDOURIDINE SYNTHASES.
|
| 0.181214 | + | fucK | b2803 | L-fuculokinase |
EG10350 |
CATALYTIC ACTIVITY: ATP + L-FUCULOSE = ADP + L-FUCULOSE
1-PHOSPHATE.
PATHWAY: SECOND STEP IN FUCOSE METABOLISM.
SIMILARITY: BELONGS TO THE FUCOKINASE / GLUCONOKINASE /
GLYCEROKINASE / XYLULOKINASE FAMILY.
|
| | fucU | b2804 | protein of fucose operon |
EG10355 |
|
| | fucR | b2805 | positive regulator of the fuc operon |
EG10353 |
FUNCTION: TRANSCRIPTIONAL ACTIVATOR OF THE FUC OPERON.
SIMILARITY: BELONGS TO THE DEOR FAMILY OF TRANSCRIPTIONAL
REGULATORS.
|
| 0.167342 | + | yeiG | b2154 | putative esterase (EC 3.1.1.-). |
EG12026 |
SIMILARITY: STRONG, TO E.COLI YAIM AND H.INFLUENZAE HI0184.
SIMILARITY: STRONG, TO HUMAN ESTERASE D.
|
| 0.157164 | + | ygjR | b3087 | orf, hypothetical protein |
EG12729 |
SIMILARITY: BELONGS TO THE GFO/IDH/MOCA FAMILY. STRONG, TO
B.SUBTILIS YULF.
|
| 0.154651 | + | yfjJ | b2626 | orf, hypothetical protein |
EG13196 |
SIMILARITY: STRONG, TO E.COLI YAGK.
|
| 0.153574 | + | insA_7 | b4294 | IS1 protein InsA |
EG40001 |
FUNCTION: ABSOLUTELY REQUIRED FOR TRANSPOSITION OF IS1.
SIMILARITY: STRONG TO INSA PROTEINS OF OTHER IS1 ELEMENTS.
|
| 0.150605 | + | yihF | b3861 | putative GTP-binding protein |
EG11832 |
SIMILARITY: TO E.COLI YDGA AND H.INFLUENZAE HI1236.
|
| 0.146831 | + | mrcA | b3396 | peptidoglycan synthetase; penicillin-binding protein 1A |
EG10748 |
FUNCTION: CELL WALL FORMATION. SYNTHESIS OF CROSS-LINKED
PEPTIDOGLYCAN FROM THE LIPID INTERMEDIATES. THE ENZYME HAS A
PENICILLIN-INSENSITIVE TRANSGLYCOSYLASE N-TERMINAL DOMAIN
(FORMATION OF LINEAR GLYCAN STRANDS) AND A PENICILLIN-SENSITIVE
TRANSPEPTIDASE C-TERMINAL DOMAIN (CROSS-LINKING OF THE PEPTIDE
SUBUNITS).
PATHWAY: FINAL STAGES IN PEPTIDOGLYCAN SYNTHESIS.
SUBCELLULAR LOCATION: TYPE II MEMBRANE PROTEIN. INNER MEMBRANE (BY
SIMILARITY).
SIMILARITY: IN THE N-TERMINAL SECTION; BELONGS TO THE
TRANSGLYCOSYLASE FAMILY.
SIMILARITY: IN THE C-TERMINAL SECTION; BELONGS TO THE
TRANSPEPTIDASE FAMILY.
|
| 0.146341 | - | b2649 | b2649 | orf, hypothetical protein |
EG13518 |
|
| 0.146016 | + | dgt | b0160 | deoxyguanosine triphosphate triphosphohydrolase |
EG10225 |
FUNCTION: DGTPASE PREFERENTIALLY HYDROLYZES DGTP OVER THE OTHER
CANONICAL NTPS.
CATALYTIC ACTIVITY: DGTP + H(2)O = DEOXYGUANOSINE + TRIPHOSPHATE.
SUBUNIT: HOMOTETRAMER.
SIMILARITY: BELONGS TO THE DGTPASE FAMILY.
CAUTION: REF.2 SEQUENCE DIFFERS FROM THAT SHOWN IN POSITIONS 89
TO 210 DUE TO A FRAMESHIFT.
|
| | htrA | b0161 | periplasmic serine protease Do; heat shock protein HtrA |
EG10463 |
FUNCTION: SERINE PROTEASE THAT IS REQUIRED AT HIGH TEMPERATURE.
INVOLVED IN THE DEGRADATION OF DAMAGED PROTEINS. IT CAN DEGRADES
ICIA, ADA, CASEIN AND GLOBIN. SHARED SPECIFICITY WITH DEGQ.
SUBUNIT: MULTIMERIC.
SUBCELLULAR LOCATION: PERIPLASMIC.
INDUCTION: HEAT SHOCK.
MISCELLANEOUS: HTRA IS INDISPENSABLE FOR BACTERIAL SURVIVAL AT
TEMPERATURES ABOVE 42 DEGREES CELSIUS.
SIMILARITY: BELONGS TO PEPTIDASE FAMILY S2C; ALSO KNOWN AS THE
DEGP/DEGQ/DEGS FAMILY.
SIMILARITY: CONTAINS 2 PDZ/DHR DOMAINS.
|
| | yaeG | b0162 | orf, hypothetical protein |
EG12335 |
FUNCTION: SEEMS TO REGULATE THE EXPRESSION OF THE OPERONS FOR THE
ENZYMES INVOLVED IN D-GALACTARATE, D-GLUCARATE AND D-GLYCERATE
UTILIZATION.
SIMILARITY: BELONGS TO THE CDAR FAMILY.
|
| 0.143324 | + | wecD | b3790 | orf, hypothetical protein |
EG11455 |
FUNCTION: TRANSAMINASE CONVERTING THYMIDINE DIPHOSPHATE(TDP)-4-
KETO-6-DEOXY-D-GLUCOSE TO TDP-4-AMINO-4,6-DIDEOXY-D-GALACTOSE, THE
IMMEDIATE PRECURSOR OF THE ECA SUGAR TDP-FUC4NAC.
PATHWAY: INVOLVED IN THE SYNTHESIS OF ENTEROBACTERIAL COMMON
ANTIGEN (ECA) AND REQUIRED FOR SYNTHESIS OF LIPOPOLYSACCHARIDE
O-SIDE CHAINS.
|
| | wecE | b3791 | putative regulator |
EG11456 |
FUNCTION: INVOLVED IN ECA ELONGATION.
PATHWAY: INVOLVED IN THE SYNTHESIS OF ENTEROBACTERIAL COMMON
ANTIGEN (ECA) AND REQUIRED FOR SYNTHESIS OF LIPOPOLYSACCHARIDE
O-SIDE CHAINS.
SIMILARITY: BELONGS TO THE DEGT/DNRJ/ERYC1 FAMILY.
|
| | wzxE | b3792 | putative cytochrome |
EG11486 |
FUNCTION: COULD BE RFFA OR RFFC.
PATHWAY: INVOLVED IN THE SYNTHESIS OF ENTEROBACTERIAL COMMON
ANTIGEN (ECA) AND REQUIRED FOR SYNTHESIS OF LIPOPOLYSACCHARIDE
O-SIDE CHAINS.
|
| | yifM_1 | b4404 | orf, conceptual translation in SwissProt is fused with b4405 |
EG14320 |
CAUTION: THIS IS A CONCEPTUAL TRANSLATION; A FRAMESHIFT WAS
INTRODUCED IN POSITION 60 TO PRODUCE THIS ORF.
|
| 0.143172 | + | sbmA | b0377 | sensitivity to microcin B17, possibly envelop protein |
EG10928 |
FUNCTION: REQUIRED FOR THE UPTAKE OF THE PEPTIDE ANTIBIOTIC
MICROCIN B17 (MCCB17).
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. INNER MEMBRANE.
SIMILARITY: STRONG, TO R.MELILOTI BACA.
|
| | yaiW | b0378 | orf, hypothetical protein |
EG13608 |
|
| 0.140373 | + | prkB | b3355 | probable phosphoribulokinase |
EG12365 |
CATALYTIC ACTIVITY: ATP + D-RIBULOSE 5-PHOSPHATE = ADP +
D-RIBULOSE 1,5-BISPHOSPHATE.
SIMILARITY: BELONGS TO THE PHOSPHORIBULOKINASE FAMILY.
|
| 0.128114 | + | fabZ | b0180 | (3R)-hydroxymyristol acyl carrier protein dehydratase |
EG11284 |
FUNCTION: INVOLVED IN SATURATED FATTY ACIDS BIOSYNTHESIS.
SUBUNIT: OLIGOMER.
SUBCELLULAR LOCATION: CYTOPLASMIC.
PTM: THE N-TERMINUS IS BLOCKED.
SIMILARITY: BELONGS TO THE THIOESTER DEHYDRATASE FAMILY.
|
| | lpxA | b0181 | UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis |
EG10545 |
FUNCTION: INVOLVED IN THE BIOSYNTHESIS OF LIPID A, A
PHOSPHORYLATED GLYCOLIPID THAT ANCHORS THE LIPOPOLYSACCHARIDE TO
THE OUTER MEMBRANE OF THE CELL.
CATALYTIC ACTIVITY: (R)-3-HYDROXYTETRADECANOYL-[ACYL-CARRIER
PROTEIN] + UDP-N-ACETYLGLUCOSAMINE = [ACYL-CARRIER PROTEIN] +
UDP-3-O-(3-HYDROXYTETRADECANOYL)-N-ACETYLGLUCOSAMINE.
PATHWAY: LIPID A BIOSYNTHESIS; FIRST STEP.
SUBUNIT: HOMOTRIMER.
SUBCELLULAR LOCATION: CYTOPLASMIC.
SIMILARITY: BELONGS TO THE TRANSFERASE HEXAPEPTIDE REPEAT FAMILY.
LPXA SUBFAMILY.
|
| | lpxB | b0182 | tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step |
EG10546 |
FUNCTION: CONDENSATION OF UDP-2,3-DIACYLGLUCOSAMINE AND
2,3-DIACYLGLUCOSAMINE-1-PHOSPHATE TO FORM LIPID A DISACCHARIDE,
A PRECURSOR OF LIPID A, A PHOSPHORYLATED GLYCOLIPID THAT ANCHORS
THE LIPOPOLYSACCHARIDE TO THE OUTER MEMBRANE OF THE CELL.
CATALYTIC ACTIVITY: UDP-2,3-BIS(3-HYDROXYTETRADECANOYL)GLUCOSAMINE
+ 2,3-BIS(3-HYDROXYTETRADECANOYL)-BETA-D-GLUCOSAMINYL 1-PHOSPHATE
= UDP + 2,3-BIS(3-HYDROXYTETRADECANOYL)-D-GLUCOSAMINYL-1,6-BETA-
D-2,3-BIS(3-HYDROXYTETRADECANOYL)-BETA-D-GLUCOSAMINYL 1-PHOSPHATE.
PATHWAY: LIPID A BIOSYNTHESIS.
SIMILARITY: BELONGS TO THE LPXB FAMILY.
|
| | rnhB | b0183 | RNAse HII, degrades RNA of DNA-RNA hybrids |
EG10861 |
FUNCTION: DEGRADES THE RIBONUCLEOTIDE MOIETY ON RNA-DNA HYBRID
MOLECULES.
CATALYTIC ACTIVITY: ENDONUCLEOLYTIC CLEAVAGE TO 5'-PHOSPHO-
MONOESTER.
COFACTOR: REQUIRES MANGANESE FOR ACTIVITY.
SUBCELLULAR LOCATION: CYTOPLASMIC (POTENTIAL).
SIMILARITY: BELONGS TO THE RNASE HII FAMILY.
|
| | dnaE | b0184 | DNA polymerase III, alpha subunit |
EG10238 |
FUNCTION: DNA POLYMERASE III IS A COMPLEX, MULTICHAIN ENZYME
RESPONSIBLE FOR MOST OF THE REPLICATIVE SYNTHESIS IN BACTERIA.
THIS DNA POLYMERASE ALSO EXHIBITS 3' TO 5' EXONUCLEASE ACTIVITY.
THE ALPHA CHAIN IS THE DNA POLYMERASE.
CATALYTIC ACTIVITY: N DEOXYNUCLEOSIDE TRIPHOSPHATE =
N PYROPHOSPHATE + DNA(N).
SUBUNIT: CONTAINS A CORE (COMPOSED OF ALPHA, EPSILON, AND THETA
CHAINS) THAT ASSOCIATES WITH A TAU SUBUNIT WHICH ALLOW THE CORE
DIMERIZATION TO FORM THE POLIII' COMPLEX. POLIII' ASSOCIATES WITH
THE GAMMA COMPLEX (COMPOSED OF CHAINS GAMMA, DELTA, DELTA', PSI,
AND CHI) AND WITH THE BETA CHAIN. THE FINAL COMPOSITION OF THE
COMPLEX IS: (ALPHA,EPSILON,THETA)[2]-TAU[2]-(GAMMA,DELTA,DELTA',
PSI,CHI)[2]-BETA[4].
SUBCELLULAR LOCATION: CYTOPLASMIC.
SIMILARITY: BELONGS TO DNA POLYMERASE TYPE-C FAMILY. DNAE
SUBFAMILY.
|
| | accA | b0185 | acetylCoA carboxylase, carboxytransferase component, alpha subunit |
EG11647 |
FUNCTION: THIS PROTEIN IS A COMPONENT OF THE ACETYL COENZYME A
CARBOXYLASE COMPLEX; FIRST, BIOTIN CARBOXYLASE CATALYZES THE
CARBOXYLATION OF THE CARRIER PROTEIN AND THEN THE TRANSCARBOXYLASE
TRANSFERS THE CARBOXYL GROUP TO FORM MALONYL-COA.
CATALYTIC ACTIVITY: CARBOXYBIOTIN CARBOXYL CARRIER PROTEIN +
ACETYL-COA = BIOTIN CARBOXYL CARRIER PROTEIN + MALONYL-COA.
PATHWAY: FIRST STEP IN LONG-CHAIN FATTY ACID SYNTHESIS.
SUBUNIT: ACETYL-COA CARBOXYLASE IS AN HETEROHEXAMER OF BIOTIN
CARBOXYL CARRIER PROTEIN, BIOTIN CARBOXYLASE AND THE TWO SUBUNITS
OF CARBOXYL TRANSFERASE IN A 2:2 COMPLEX.
SIMILARITY: TO THE C-TERMINUS OF MAMMALIAN PROPIONYL-COA
CARBOXYLASE BETA CHAIN.
|
| | ldcC | b0186 | lysine decarboxylase 2, constitutive |
EG13219 |
FUNCTION: LDC IS CONSTITUTIVELY BUT WEAKLY EXPRESSED UNDER VARIOUS
CONDITIONS. OPTIMUM ACTIVITY IS ACHIEVED BETWEEN PH 6.2 TO 8.0.
CATALYTIC ACTIVITY: L-LYSINE = CADAVERINE + CO(2).
COFACTOR: PYRIDOXAL PHOSPHATE.
SUBUNIT: HOMODECAMER.
SIMILARITY: BELONGS TO FAMILY 1 OF ORNITHINE, LYSINE, AND ARGININE
DECARBOXYLASES.
|
| | yaeR | b0187 | orf, hypothetical protein |
EG13224 |
SIMILARITY: STRONG, TO B.SUBTILIS YWKD.
|
| | mesJ | b0188 | cell cycle protein |
EG13220 |
SIMILARITY: BELONGS TO THE UPF0072 (MESJ/YCF62) FAMILY.
|
| 0.126857 | + | ybaY | b0453 | glycoprotein/polysaccharide metabolism |
EG13253 |
SUBCELLULAR LOCATION: ATTACHED TO THE MEMBRANE BY A LIPID
ANCHOR (PROBABLE).
|
| 0.122412 | + | b1527 | b1527 | orf, hypothetical protein |
EG13819 |
|
| 0.121644 | + | b1741 | b1741 | putative excinuclease subunit |
|
|
| 0.121623 | + | flgG | b1078 | flagellar biosynthesis, cell-distal portion of basal-body rod |
EG14271 |
SUBUNIT: THE BASAL BODY CONSTITUTES A MAJOR PORTION OF THE
FLAGELLAR ORGANELLE AND CONSISTS OF FOUR RINGS (L,P,S, AND M)
MOUNTED ON A CENTRAL ROD. THE ROD CONSISTS OF ABOUT 26 SUBUNITS OF
FLGG IN THE DISTAL PORTION, AND FLGB, FLGC AND FLGF ARE THOUGHT TO
BUILD UP THE PROXIMAL PORTION OF THE ROD WITH ABOUT 6 SUBUNITS
EACH.
SIMILARITY: BELONGS TO THE FLAGELLA BASAL BODY ROD PROTEINS
FAMILY.
|
| | flgH | b1079 | flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein |
EG20264 |
FUNCTION: ASSEMBLES AROUND THE ROD TO FORM THE L-RING AND PROBABLY
PROTECTS THE MOTOR/BASAL BODY FROM SHEARING FORCES DURING
ROTATION.
SUBUNIT: THE BASAL BODY CONSTITUTES A MAJOR PORTION OF THE
FLAGELLAR ORGANELLE AND CONSISTS OF FOUR RINGS (L,P,S, AND M)
MOUNTED ON A CENTRAL ROD.
SUBCELLULAR LOCATION: ATTACHED TO THE OUTER MEMBRANE BY A LIPID
ANCHOR (PROBABLE).
SIMILARITY: BELONGS TO THE FLGH FAMILY.
|
| | flgI | b1080 | homolog of Salmonella P-ring of flagella basal body |
EG20265 |
FUNCTION: ASSEMBLES AROUND THE ROD TO FORM THE L-RING AND PROBABLY
PROTECTS THE MOTOR/BASAL BODY FROM SHEARING FORCES DURING
ROTATION.
SUBUNIT: THE BASAL BODY CONSTITUTES A MAJOR PORTION OF THE
FLAGELLAR ORGANELLE AND CONSISTS OF FOUR RINGS (L,P,S, AND M)
MOUNTED ON A CENTRAL ROD.
SUBCELLULAR LOCATION: PERIPLASMIC.
SIMILARITY: BELONGS TO THE FLGI FAMILY.
|
| | flgJ | b1081 | flagellar biosynthesis |
EG14272 |
FUNCTION: NOT KNOWN.
|
| | flgK | b1082 | flagellar biosynthesis, hook-filament junction protein 1 |
EG11967 |
SIMILARITY: BELONGS TO THE FLAGELLA BASAL BODY ROD PROTEINS
FAMILY.
|
| | flgL | b1083 | flagellar biosynthesis; hook-filament junction protein |
EG11545 |
SIMILARITY: BELONGS TO THE BACTERIAL FLAGELLIN FAMILY.
|
| 0.119055 | + | b1452 | b1452 | putative receptor |
|
|
| 0.118760 | + | b2740 | b2740 | putative transport protein |
EG13108 |
SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN. INNER MEMBRANE
(POTENTIAL).
SIMILARITY: BELONGS TO THE GNTP FAMILY OF PERMEASES.
|
| 0.111582 | + | ydfH | b1540 | orf, hypothetical protein |
EG13820 |
SIMILARITY: BELONGS TO THE GNTR FAMILY OF TRANSCRIPTIONAL
REGULATORS.
|