Newly-identified clusters

Known E. coli regulons

Consensus

Contributing sequences

Full dataset matches

E. coli upstream matches

CGACCTTCGGGTTATGAGCCCGACGAG clus0 cluster0: data set matches promoter0
**CGGTATAAT*C**CG**TT**TTT* clus1 cluster1: data set matches promoter1
*******AAAAAAAAAG*CC****A** clus2 cluster2: data set matches promoter2
CAGCAATAGTGGACACGCGACTAAGTG clus3 cluster3: data set matches promoter3
*TGA****G*TCACA*TTTTT*A**** clus4 cluster4: data set matches promoter4
**TTT***T*ATAATG*GC**C****A clus5 cluster5: data set matches promoter5
AAA*C**C*****GG****TTTTTTTT clus6 cluster6: data set matches promoter6
*AATT*C**T*A****TTTG*C*G**T clus7 cluster7: data set matches promoter7
A**AAAA**G**GC**ATTATAGCA*A clus8 cluster8: data set matches promoter8
AA*TTA*TGATTTA*TGTATGATG*T* clus9 cluster9: data set matches promoter9
CC*T*G*ACCTG*T**GGATAA**CC* clus10 cluster10: data set matches promoter10
GG****TTTTTTTAT*T********** clus11 cluster11: data set matches promoter11
*AA*G*GC*GGCTTT**T*ATTT**** clus12 cluster12: data set matches promoter12
*CAGCC*TTTTTTT*******AA*TT* clus13 cluster13: data set matches promoter13
**T**A*TGGT**TACCA*TTTT**** clus14 cluster14: data set matches promoter14
**A*AAAAAAA*CCCGCC******GGG clus15 cluster15: data set matches promoter15
*T**A**A**GG*GTTTTT***C**A* clus16 cluster16: data set matches promoter16
C*G******CCGGC*TTTTTTTT**** clus17 cluster17: data set matches promoter17
****CGTA*GC*G**TAAG*G***C** clus18 cluster18: data set matches promoter18
T**C*C*ATCTTG***TCA***G*A** clus19 cluster19: data set matches promoter19
*CA*AATA*C*****TTT*******T* clus20 cluster20: data set matches promoter20
**TG******TTGT*A****A**T*** clus21 cluster21: data set matches promoter21
AACCC***GGTC****G*T**A*TCC* clus22 cluster22: data set matches promoter22
******T**G*AAAAT*CC******** clus23 cluster23: data set matches promoter23
***T**TT*ACA****T*TAA*A**** clus24 cluster24: data set matches promoter24
******A****CTCC*GA*A*A***** clus25 cluster25: data set matches promoter25
*******A*T*TA**A*AAT**T**** clus26 cluster26: data set matches promoter26
C*****GA*G*T*AA**A**A*A*A** clus27 cluster27: data set matches promoter27
*T*AT**T*CC**TAA*AA****A*** clus28 cluster28: data set matches promoter28
C****GACCCCCT*C*TG******AG* clus29 cluster29: data set matches promoter29
A**A*TTG*CA*G**A**T****A*** clus30 cluster30: data set matches promoter30
*T*T*T**A**A*T****C******T* clus31 cluster31: data set matches promoter31
***A***TA*T*A**A*******TA*T clus32 cluster32: data set matches promoter32
CCCA*CA*******A************ clus33 cluster33: data set matches promoter33
*AA****A**A*************TTG clus34 cluster34: data set matches promoter34
********G**A*G***T***CGC*** clus35 cluster35: data set matches promoter35
*****T*****AG*A*G**G*C***** clus36 cluster36: data set matches promoter36
*******AAT*TAT************* clus37 cluster37: data set matches promoter37
***************G**A**G****T clus38 cluster38: data set matches promoter38
******************C*****G** clus39 cluster39: data set matches promoter39